arcs
Scaffolding genome sequence assemblies using 10X Genomics data

Usage

BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install arcs
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda arcs==1.2.8--hdcf5f25_0
Update to latest version
You can update your package to the latest version using the following command:
conda update arcs
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull quay.io/biocontainers/arcs:1.2.8--hdcf5f25_0
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.8--hdcf5f25_0
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
101.3K
Versions

1.2.8, 1.2.7, 1.2.6, 1.2.5, 1.2.4, 1.2.3, 1.2.2, 1...

License
Last Update
2024-11-07
Type
Version
Last Update
Size
Full Tag
Security
1.1.0
0.00M
conda install -c conda-forge -c bioconda arcs==1.1.0--he1c1bb9_0
1.1.0
2024-07-10
15.91M
docker pull quay.io/biocontainers/arcs:1.1.0--he1c1bb9_0
1.1.0
2019-10-27
15.72M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.1.0--he1c1bb9_0
1.1.1
0.00M
conda install -c conda-forge -c bioconda arcs==1.1.1--h176a8bc_0
1.1.1
2024-07-10
16.49M
docker pull quay.io/biocontainers/arcs:1.1.1--h176a8bc_0
1.1.1
2020-01-11
15.73M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.1.1--h176a8bc_0
1.2.0
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.0--h176a8bc_0
1.2.0
2021-01-22
16.61M
docker pull quay.io/biocontainers/arcs:1.2.0--h176a8bc_0
1.2.0
2021-01-22
15.73M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.0--h176a8bc_0
1.2.1
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.1--h176a8bc_0
1.2.1
2021-01-31
16.61M
docker pull quay.io/biocontainers/arcs:1.2.1--h176a8bc_0
1.2.1
2021-01-31
15.73M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.1--h176a8bc_0
1.2.1
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.1--h176a8bc_1
1.2.1
2021-02-06
17.34M
docker pull quay.io/biocontainers/arcs:1.2.1--h176a8bc_1
1.2.1
2021-02-06
16.43M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.1--h176a8bc_1
1.2.1
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.1--hc90279e_2
1.2.1
2021-03-26
18.79M
docker pull quay.io/biocontainers/arcs:1.2.1--hc90279e_2
1.2.1
2021-03-26
17.95M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.1--hc90279e_2
1.2.2
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.2--hc90279e_0
1.2.2
2021-06-02
19.46M
docker pull quay.io/biocontainers/arcs:1.2.2--hc90279e_0
1.2.2
2021-06-02
18.07M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.2--hc90279e_0
1.2.3
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.3--hc90279e_0
1.2.3
2022-02-12
12.00M
docker pull quay.io/biocontainers/arcs:1.2.3--hc90279e_0
1.2.3
2022-02-12
11.22M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.3--hc90279e_0
1.2.3
2022-03-09
11.22M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.3--h7ff8a90_1
1.2.3
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.3--h7ff8a90_1
1.2.3
2022-02-22
11.99M
docker pull quay.io/biocontainers/arcs:1.2.3--h7ff8a90_1
1.2.5
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.5--h7ff8a90_0
1.2.5
2023-01-07
12.40M
docker pull quay.io/biocontainers/arcs:1.2.5--h7ff8a90_0
1.2.5
2023-01-07
11.42M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.5--h7ff8a90_0
1.2.5
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.5--h21ec9f0_1
1.2.5
2023-05-28
12.20M
docker pull quay.io/biocontainers/arcs:1.2.5--h21ec9f0_1
1.2.5
2023-05-28
11.42M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.5--h21ec9f0_1
1.2.4
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.4--h7ff8a90_1
1.2.4
2022-08-01
12.19M
docker pull quay.io/biocontainers/arcs:1.2.4--h7ff8a90_1
1.2.4
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.4--h7ff8a90_0
1.2.4
2022-06-08
12.19M
docker pull quay.io/biocontainers/arcs:1.2.4--h7ff8a90_0
1.2.4
2022-06-08
11.41M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.4--h7ff8a90_0
1.2.4
2022-08-02
11.41M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.4--h7ff8a90_1
1.2.6
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.6--h21ec9f0_0
1.2.6
2023-12-07
11.95M
docker pull quay.io/biocontainers/arcs:1.2.6--h21ec9f0_0
1.2.6
2023-12-07
11.46M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.6--h21ec9f0_0
1.2.7
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.7--h21ec9f0_0
1.2.7
2024-03-27
86.07M
docker pull quay.io/biocontainers/arcs:1.2.7--h21ec9f0_0
1.2.7
2024-03-26
80.74M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.7--h21ec9f0_0
1.2.7
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.7--hdcf5f25_1
1.2.7
2024-06-09
96.94M
docker pull quay.io/biocontainers/arcs:1.2.7--hdcf5f25_1
1.2.7
2024-06-09
93.68M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.7--hdcf5f25_1
1.2.7
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.7--hdcf5f25_2
1.2.7
2024-07-24
101.90M
docker pull quay.io/biocontainers/arcs:1.2.7--hdcf5f25_2
1.2.7
2024-07-25
95.69M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.7--hdcf5f25_2
1.2.8
0.00M
conda install -c conda-forge -c bioconda arcs==1.2.8--hdcf5f25_0
1.2.8
2024-11-06
100.08M
docker pull quay.io/biocontainers/arcs:1.2.8--hdcf5f25_0
1.2.8
2024-11-07
93.77M
singularity run https://depot.galaxyproject.org/singularity/arcs:1.2.8--hdcf5f25_0