bioconductor-surfaltr
Rapid comparison of surface protein isoform membrane topologies through surfaltr

Usage

BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install bioconductor-surfaltr
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.12.0--r44hdfd78af_0
Update to latest version
You can update your package to the latest version using the following command:
conda update bioconductor-surfaltr
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.12.0--r44hdfd78af_0
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.12.0--r44hdfd78af_0
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
2.5K
Versions

1.8.0, 1.6.0, 1.4.0, 1.12.0, 1.0.0

License
GitHub Repo
Last Update
2024-12-21
Type
Version
Last Update
Size
Full Tag
Security
1.0.0
0.00M
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.0.0--r41hdfd78af_0
1.0.0
2021-11-06
379.28M
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.0.0--r41hdfd78af_0
1.0.0
2021-11-12
367.94M
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.0.0--r41hdfd78af_0
1.4.0
0.00M
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.4.0--r42hdfd78af_0
1.4.0
2022-11-07
442.88M
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.4.0--r42hdfd78af_0
1.4.0
2022-11-22
428.90M
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.4.0--r42hdfd78af_0
1.6.0
0.00M
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.6.0--r43hdfd78af_0
1.6.0
2023-07-14
463.42M
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.6.0--r43hdfd78af_0
1.6.0
2023-07-14
449.24M
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.6.0--r43hdfd78af_0
1.8.0
0.00M
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.8.0--r43hdfd78af_0
1.8.0
2023-12-07
471.30M
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.8.0--r43hdfd78af_0
1.8.0
2023-12-08
457.41M
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.8.0--r43hdfd78af_0
1.12.0
0.00M
conda install -c conda-forge -c bioconda bioconductor-surfaltr==1.12.0--r44hdfd78af_0
1.12.0
2024-12-21
509.74M
docker pull quay.io/biocontainers/bioconductor-surfaltr:1.12.0--r44hdfd78af_0
1.12.0
2024-12-21
495.86M
singularity run https://depot.galaxyproject.org/singularity/bioconductor-surfaltr:1.12.0--r44hdfd78af_0