circlator
Circlator: a tool to circularise genome assemblies
Usage
BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install circlator
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda circlator==1.3.1--py35_0
Update to latest version
You can update your package to the latest version using the following command:
conda update circlator
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull biocontainers/circlator:v1.5.5-3-deb_cv1
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/circlator:1.3.1--py35_0
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
297.8K
GitHub Repo
Last Update
2024-06-23
Type | Version | Last Update | Size | Full Tag | Security |
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![]() | 1.5.2 | 2024-06-23 | 103.86M | docker pull quay.io/biocontainers/circlator:1.5.2--py35_1 | |
![]() | 1.5.2 | 2024-06-23 | 109.44M | docker pull quay.io/biocontainers/circlator:1.5.2--py35_0 | |
![]() | 1.5.2 | 2024-06-23 | 103.42M | docker pull quay.io/biocontainers/circlator:1.5.2--py36_0 | |
![]() | 1.5.2 | 2024-06-23 | 104.57M | docker pull quay.io/biocontainers/circlator:1.5.2--py36_1 | |
![]() | 1.5.2 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.2--py35_1 | ||
![]() | 1.5.2 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.2--py35_0 | ||
![]() | 1.5.2 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.2--py36_0 | ||
![]() | 1.5.2 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.2--py36_1 | ||
![]() | 1.5.2 | 2019-09-02 | 107.39M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.2--py35_0 | |
![]() | 1.5.2 | 2019-08-14 | 101.85M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.2--py35_1 | |
![]() | 1.5.2 | 2019-09-02 | 101.41M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.2--py36_0 | |
![]() | 1.5.2 | 2019-08-14 | 102.52M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.2--py36_1 | |
![]() | 1.5.1 | 2024-06-23 | 85.19M | docker pull quay.io/biocontainers/circlator:1.5.1--py36_0 | |
![]() | 1.5.1 | 2024-06-23 | 91.71M | docker pull quay.io/biocontainers/circlator:1.5.1--py35_0 | |
![]() | 1.5.1 | 2024-06-23 | 91.90M | docker pull quay.io/biocontainers/circlator:1.5.1--py34_0 | |
![]() | 1.5.1 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.1--py36_0 | ||
![]() | 1.5.1 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.1--py35_0 | ||
![]() | 1.5.1 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.1--py34_0 | ||
![]() | 1.5.1 | 2019-08-14 | 90.68M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.1--py34_0 | |
![]() | 1.5.1 | 2019-08-14 | 91.07M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.1--py35_0 | |
![]() | 1.5.1 | 2019-08-14 | 84.54M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.1--py36_0 | |
![]() | 1.4.0 | 2024-06-23 | 100.61M | docker pull quay.io/biocontainers/circlator:1.4.0--py35_0 | |
![]() | 1.4.0 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.4.0--py35_0 | ||
![]() | 1.4.0 | 2019-08-14 | 97.27M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.4.0--py35_0 | |
![]() | 1.1.2 | 2024-06-23 | 96.43M | docker pull quay.io/biocontainers/circlator:1.1.2--py35_0 | |
![]() | 1.1.2 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.1.2--py35_0 | ||
![]() | 1.1.2 | 2019-08-14 | 93.12M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.1.2--py35_0 | |
![]() | 1.5.0 | 2024-06-23 | 91.71M | docker pull quay.io/biocontainers/circlator:1.5.0--py35_0 | |
![]() | 1.5.0 | 2024-06-23 | 91.90M | docker pull quay.io/biocontainers/circlator:1.5.0--py34_0 | |
![]() | 1.5.0 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.0--py35_0 | ||
![]() | 1.5.0 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.0--py34_0 | ||
![]() | 1.5.0 | 2019-08-14 | 90.68M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.0--py34_0 | |
![]() | 1.5.0 | 2019-08-14 | 91.07M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.0--py35_0 | |
![]() | 1.5.5 | 2024-06-23 | 124.49M | docker pull quay.io/biocontainers/circlator:1.5.5--py36_1 | |
![]() | 1.5.5 | 2024-06-23 | 104.57M | docker pull quay.io/biocontainers/circlator:1.5.5--py36_0 | |
![]() | 1.5.5 | 2024-06-23 | 103.86M | docker pull quay.io/biocontainers/circlator:1.5.5--py35_0 | |
![]() | 1.5.5 | 2024-06-23 | 123.50M | docker pull quay.io/biocontainers/circlator:1.5.5--py35_1 | |
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py36_1 | ||
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py36_0 | ||
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py35_0 | ||
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py35_1 | ||
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py_2 | ||
![]() | 1.5.5 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.5.5--py_3 | ||
![]() | 1.5.5 | 2024-06-23 | 117.84M | docker pull quay.io/biocontainers/circlator:1.5.5--py_2 | |
![]() | 1.5.5 | 2024-06-23 | 611.65M | docker pull quay.io/biocontainers/circlator:1.5.5--py_3 | |
![]() | 1.5.5 | 2019-09-02 | 101.85M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py35_0 | |
![]() | 1.5.5 | 2019-08-14 | 115.33M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py35_1 | |
![]() | 1.5.5 | 2019-09-02 | 102.52M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py36_0 | |
![]() | 1.5.5 | 2019-08-14 | 116.29M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py36_1 | |
![]() | 1.5.5 | 2019-09-02 | 115.37M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py_2 | |
![]() | 1.5.5 | 2019-08-14 | 604.30M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.5.5--py_3 | |
![]() | 1.3.0 | 2024-06-23 | 99.95M | docker pull quay.io/biocontainers/circlator:1.3.0--py35_0 | |
![]() | 1.3.0 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.3.0--py35_0 | ||
![]() | 1.3.0 | 2019-08-14 | 96.82M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.3.0--py35_0 | |
![]() | 1.3.1 | 2024-06-23 | 100.77M | docker pull quay.io/biocontainers/circlator:1.3.1--py35_0 | |
![]() | 1.3.1 | 0.00M | conda install -c conda-forge -c bioconda circlator==1.3.1--py35_0 | ||
![]() | 1.3.1 | 2019-08-14 | 97.44M | singularity run https://depot.galaxyproject.org/singularity/circlator:1.3.1--py35_0 | |
![]() | v1.4.1-1-deb | 2018-06-01 | 130.11M | docker pull biocontainers/circlator:v1.4.1-1-deb_cv1 | |
![]() | v1.5.5-3-deb | 2019-09-09 | 286.53M | docker pull biocontainers/circlator:v1.5.5-3-deb_cv1 |