mobster
Ngs tool for detecting mei and gene retrotransposition events in wgs and wes data, see thung et al. genome biol. 2014 for more information.
Usage
BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install mobster
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda mobster==0.2.2--py27_1
Update to latest version
You can update your package to the latest version using the following command:
conda update mobster
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull quay.io/biocontainers/mobster:0.2.2--py27_1
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py36_1
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
259.7K
Homepage
Versions
0.2.4.1, 0.2.3.1, 0.2.2, 0.2.1
License
GitHub Repo
Last Update
2024-06-26
Type | Version | Last Update | Size | Full Tag | Security |
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![]() | 0.2.1 | 2024-06-26 | 107.24M | docker pull quay.io/biocontainers/mobster:0.2.1--py34_0 | |
![]() | 0.2.1 | 2024-06-26 | 101.95M | docker pull quay.io/biocontainers/mobster:0.2.1--py27_0 | |
![]() | 0.2.1 | 2024-06-26 | 113.70M | docker pull quay.io/biocontainers/mobster:0.2.1--py35_0 | |
![]() | 0.2.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.1--py34_0 | ||
![]() | 0.2.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.1--py27_0 | ||
![]() | 0.2.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.1--py35_0 | ||
![]() | 0.2.1 | 2019-08-17 | 102.63M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.1--py27_0 | |
![]() | 0.2.1 | 2019-08-17 | 107.31M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.1--py34_0 | |
![]() | 0.2.1 | 2019-08-17 | 113.36M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.1--py35_0 | |
![]() | 0.2.3.1 | 2024-06-26 | 116.19M | docker pull quay.io/biocontainers/mobster:0.2.3.1--py35_0 | |
![]() | 0.2.3.1 | 2024-06-26 | 116.66M | docker pull quay.io/biocontainers/mobster:0.2.3.1--py36_0 | |
![]() | 0.2.3.1 | 2024-06-26 | 110.25M | docker pull quay.io/biocontainers/mobster:0.2.3.1--py27_0 | |
![]() | 0.2.3.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.3.1--py35_0 | ||
![]() | 0.2.3.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.3.1--py36_0 | ||
![]() | 0.2.3.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.3.1--py27_0 | ||
![]() | 0.2.3.1 | 2019-08-17 | 109.95M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.3.1--py27_0 | |
![]() | 0.2.3.1 | 2019-08-17 | 115.80M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.3.1--py35_0 | |
![]() | 0.2.3.1 | 2019-08-17 | 116.23M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.3.1--py36_0 | |
![]() | 0.2.4.1 | 2024-06-26 | 124.31M | docker pull quay.io/biocontainers/mobster:0.2.4.1--1 | |
![]() | 0.2.4.1 | 2024-06-26 | 122.75M | docker pull quay.io/biocontainers/mobster:0.2.4.1--py36_0 | |
![]() | 0.2.4.1 | 2024-06-26 | 122.21M | docker pull quay.io/biocontainers/mobster:0.2.4.1--py35_0 | |
![]() | 0.2.4.1 | 2024-06-26 | 116.22M | docker pull quay.io/biocontainers/mobster:0.2.4.1--py27_0 | |
![]() | 0.2.4.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.4.1--1 | ||
![]() | 0.2.4.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.4.1--py36_0 | ||
![]() | 0.2.4.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.4.1--py35_0 | ||
![]() | 0.2.4.1 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.4.1--py27_0 | ||
![]() | 0.2.4.1 | 2019-08-17 | 123.62M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.4.1--1 | |
![]() | 0.2.4.1 | 2019-08-17 | 115.53M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.4.1--py27_0 | |
![]() | 0.2.4.1 | 2019-08-17 | 121.43M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.4.1--py35_0 | |
![]() | 0.2.4.1 | 2019-08-17 | 121.92M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.4.1--py36_0 | |
![]() | 0.2.2 | 2024-06-26 | 109.01M | docker pull quay.io/biocontainers/mobster:0.2.2--py34_0 | |
![]() | 0.2.2 | 2024-06-26 | 116.17M | docker pull quay.io/biocontainers/mobster:0.2.2--py35_1 | |
![]() | 0.2.2 | 2024-06-26 | 108.96M | docker pull quay.io/biocontainers/mobster:0.2.2--py35_0 | |
![]() | 0.2.2 | 2024-06-26 | 109.51M | docker pull quay.io/biocontainers/mobster:0.2.2--py36_0 | |
![]() | 0.2.2 | 2024-06-26 | 116.64M | docker pull quay.io/biocontainers/mobster:0.2.2--py36_1 | |
![]() | 0.2.2 | 2024-06-26 | 103.73M | docker pull quay.io/biocontainers/mobster:0.2.2--py27_0 | |
![]() | 0.2.2 | 2024-06-26 | 110.27M | docker pull quay.io/biocontainers/mobster:0.2.2--py27_1 | |
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py34_0 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py35_1 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py35_0 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py36_0 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py36_1 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py27_0 | ||
![]() | 0.2.2 | 0.00M | conda install -c conda-forge -c bioconda mobster==0.2.2--py27_1 | ||
![]() | 0.2.2 | 2019-09-01 | 104.41M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py27_0 | |
![]() | 0.2.2 | 2019-08-17 | 109.97M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py27_1 | |
![]() | 0.2.2 | 2019-08-17 | 109.09M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py34_0 | |
![]() | 0.2.2 | 2019-09-01 | 109.62M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py35_0 | |
![]() | 0.2.2 | 2019-08-17 | 115.79M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py35_1 | |
![]() | 0.2.2 | 2019-09-01 | 110.15M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py36_0 | |
![]() | 0.2.2 | 2019-08-17 | 116.20M | singularity run https://depot.galaxyproject.org/singularity/mobster:0.2.2--py36_1 |