mummer4
MUMmer is a system for rapidly aligning entire genomes
Usage
BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install mummer4
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda mummer4==4.0.1--pl5321h9948957_0
Update to latest version
You can update your package to the latest version using the following command:
conda update mummer4
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull quay.io/biocontainers/mummer4:4.0.1--pl5321h9948957_0
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321hdbdd923_7
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
296.1K
Homepage
Versions
4.0.1, 4.0.0rc1, 4.0.0beta2, 4.0.0
License
GitHub Repo
Last Update
2025-02-04
Type | Version | Last Update | Size | Full Tag | Security |
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![]() | 4.0.0beta2 | 2024-06-29 | 31.93M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl526hfc679d8_2 | |
![]() | 4.0.0beta2 | 2024-06-29 | 31.93M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl526hfc679d8_3 | |
![]() | 4.0.0beta2 | 2024-06-29 | 35.19M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl5.22.0_0 | |
![]() | 4.0.0beta2 | 2024-06-29 | 35.19M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl5.22.0_1 | |
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl526hfc679d8_2 | ||
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl526hfc679d8_3 | ||
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl5.22.0_0 | ||
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl5.22.0_1 | ||
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl526hf484d3e_4 | ||
![]() | 4.0.0beta2 | 2024-06-29 | 33.58M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl526hf484d3e_4 | |
![]() | 4.0.0beta2 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0beta2--pl526he1b5a44_5 | ||
![]() | 4.0.0beta2 | 2024-06-29 | 37.05M | docker pull quay.io/biocontainers/mummer4:4.0.0beta2--pl526he1b5a44_5 | |
![]() | 4.0.0beta2 | 2019-09-01 | 34.32M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl5.22.0_0 | |
![]() | 4.0.0beta2 | 2019-08-18 | 34.32M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl5.22.0_1 | |
![]() | 4.0.0beta2 | 2020-01-15 | 34.20M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl526he1b5a44_5 | |
![]() | 4.0.0beta2 | 2019-08-18 | 32.60M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl526hf484d3e_4 | |
![]() | 4.0.0beta2 | 2019-09-01 | 31.06M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl526hfc679d8_2 | |
![]() | 4.0.0beta2 | 2019-08-18 | 31.06M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0beta2--pl526hfc679d8_3 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl526he1b5a44_0 | ||
![]() | 4.0.0rc1 | 2020-12-15 | 37.13M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl526he1b5a44_0 | |
![]() | 4.0.0rc1 | 2020-12-15 | 34.17M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl526he1b5a44_0 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5262h1b792b2_1 | ||
![]() | 4.0.0rc1 | 2021-03-25 | 37.30M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5262h1b792b2_1 | |
![]() | 4.0.0rc1 | 2021-03-25 | 35.68M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5262h1b792b2_1 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321h1b792b2_2 | ||
![]() | 4.0.0rc1 | 2022-01-14 | 29.49M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321h1b792b2_2 | |
![]() | 4.0.0rc1 | 2022-01-15 | 28.99M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321h1b792b2_2 | |
![]() | 4.0.0rc1 | 2022-03-10 | 29.01M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321h87f3376_3 | |
![]() | 4.0.0rc1 | 2022-10-30 | 29.17M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321h87f3376_4 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321h87f3376_4 | ||
![]() | 4.0.0rc1 | 2022-10-29 | 30.78M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321h87f3376_4 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321h87f3376_3 | ||
![]() | 4.0.0rc1 | 2022-02-22 | 29.51M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321h87f3376_3 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321hdbdd923_6 | ||
![]() | 4.0.0rc1 | 2023-05-15 | 29.67M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321hdbdd923_6 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321h87f3376_5 | ||
![]() | 4.0.0rc1 | 2023-05-11 | 29.68M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321h87f3376_5 | |
![]() | 4.0.0rc1 | 2023-05-11 | 29.17M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321h87f3376_5 | |
![]() | 4.0.0rc1 | 2023-05-16 | 29.16M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321hdbdd923_6 | |
![]() | 4.0.0rc1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0rc1--pl5321hdbdd923_7 | ||
![]() | 4.0.0rc1 | 2024-06-19 | 30.38M | docker pull quay.io/biocontainers/mummer4:4.0.0rc1--pl5321hdbdd923_7 | |
![]() | 4.0.0rc1 | 2024-06-19 | 29.35M | singularity run https://depot.galaxyproject.org/singularity/mummer4:4.0.0rc1--pl5321hdbdd923_7 | |
![]() | 4.0.0 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.0--pl5321h9948957_0 | ||
![]() | 4.0.0 | 2025-01-26 | 52.61M | docker pull quay.io/biocontainers/mummer4:4.0.0--pl5321h9948957_0 | |
![]() | 4.0.1 | 0.00M | conda install -c conda-forge -c bioconda mummer4==4.0.1--pl5321h9948957_0 | ||
![]() | 4.0.1 | 2025-02-04 | 52.63M | docker pull quay.io/biocontainers/mummer4:4.0.1--pl5321h9948957_0 |