BioContainersvarvamp
Variable virusamplicons (varvamp) is a tool to design primers for highly diverse viruses
Usage
BioConda Installation
With an activated BioConda channel (see Set up bioconda channels), install with:
conda install varvamp
More information about BioConda can be found here
Install specific version
From the Packages and Containers tab you can select a conda package version to install:
conda install -c conda-forge -c bioconda varvamp==1.2.2--pyhdfd78af_0
Update to latest version
You can update your package to the latest version using the following command:
conda update varvamp
Docker Installation
You first need to be sure that docker is installed in your system, then you can install the containers using the following command:
docker pull quay.io/biocontainers/varvamp:1.2.2--pyhdfd78af_0
For docker containers no latest version is available, you always need to use the container tag.
Singularity Installation
You first need to be sure that singularity is installed in your system, then you can use the containers using the following command:
singularity run https://depot.galaxyproject.org/singularity/varvamp:1.2.1--pyhdfd78af_0
For docker containers no latest version is available, you always need to use the container tag.
Keyword
Downloads
109
GitHub Repo
Last Update
2025-02-07
Type | Version | Last Update | Size | Full Tag | Security |
|---|
 | 0.4 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.4--pyhdfd78af_0 | ||
 | 0.4 | 2023-04-02 | 147.28M | docker pull quay.io/biocontainers/varvamp:0.4--pyhdfd78af_0 | |
 | 0.4 | 2023-04-08 | 136.72M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.4--pyhdfd78af_0 | |
| 0.8.3 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.8.3--pyhdfd78af_0 | ||
| 0.8.3 | 2023-06-29 | 144.00M | docker pull quay.io/biocontainers/varvamp:0.8.3--pyhdfd78af_0 | |
| 0.8.3 | 2023-06-29 | 136.91M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.8.3--pyhdfd78af_0 | |
| 0.9 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9--pyhdfd78af_0 | ||
| 0.9 | 2023-07-26 | 144.34M | docker pull quay.io/biocontainers/varvamp:0.9--pyhdfd78af_0 | |
| 0.9 | 2023-07-26 | 137.25M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9--pyhdfd78af_0 | |
| 0.9.1 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.1--pyhdfd78af_0 | ||
| 0.9.1 | 2023-08-01 | 144.35M | docker pull quay.io/biocontainers/varvamp:0.9.1--pyhdfd78af_0 | |
| 0.9.1 | 2023-08-01 | 137.25M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.1--pyhdfd78af_0 | |
| 0.9.2 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.2--pyhdfd78af_1 | ||
| 0.9.2 | 2023-08-15 | 375.86M | docker pull quay.io/biocontainers/varvamp:0.9.2--pyhdfd78af_1 | |
| 0.9.2 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.2--pyhdfd78af_0 | ||
| 0.9.2 | 2023-08-08 | 144.59M | docker pull quay.io/biocontainers/varvamp:0.9.2--pyhdfd78af_0 | |
| 0.9.2 | 2023-08-08 | 137.48M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.2--pyhdfd78af_0 | |
| 0.9.2 | 2023-08-15 | 353.75M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.2--pyhdfd78af_1 | |
| 0.9.3 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.3--pyhdfd78af_0 | ||
| 0.9.3 | 2023-09-19 | 375.16M | docker pull quay.io/biocontainers/varvamp:0.9.3--pyhdfd78af_0 | |
| 0.9.3 | 2023-09-19 | 353.11M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.3--pyhdfd78af_0 | |
| 0.9.4 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.4--pyhdfd78af_0 | ||
| 0.9.4 | 2023-10-17 | 375.80M | docker pull quay.io/biocontainers/varvamp:0.9.4--pyhdfd78af_0 | |
| 0.9.4 | 2023-10-18 | 353.63M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.4--pyhdfd78af_0 | |
| 1.0.1 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.0.1--pyhdfd78af_0 | ||
| 1.0.1 | 2023-12-14 | 378.24M | docker pull quay.io/biocontainers/varvamp:1.0.1--pyhdfd78af_0 | |
| 1.0.1 | 2023-12-14 | 356.46M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.0.1--pyhdfd78af_0 | |
| 1.0 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.0--pyhdfd78af_0 | ||
| 1.0 | 2023-12-02 | 378.21M | docker pull quay.io/biocontainers/varvamp:1.0--pyhdfd78af_0 | |
| 1.0 | 2023-12-02 | 356.43M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.0--pyhdfd78af_0 | |
| 0.9.5 | 0.00M | conda install -c conda-forge -c bioconda varvamp==0.9.5--pyhdfd78af_0 | ||
| 0.9.5 | 2023-11-20 | 377.59M | docker pull quay.io/biocontainers/varvamp:0.9.5--pyhdfd78af_0 | |
| 0.9.5 | 2023-11-21 | 355.85M | singularity run https://depot.galaxyproject.org/singularity/varvamp:0.9.5--pyhdfd78af_0 | |
| 1.1.1 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.1.1--pyhdfd78af_0 | ||
| 1.1.1 | 2024-01-26 | 379.72M | docker pull quay.io/biocontainers/varvamp:1.1.1--pyhdfd78af_0 | |
| 1.1.1 | 2024-01-31 | 357.89M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.1.1--pyhdfd78af_0 | |
| 1.1 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.1--pyhdfd78af_0 | ||
| 1.1 | 2024-01-24 | 379.72M | docker pull quay.io/biocontainers/varvamp:1.1--pyhdfd78af_0 | |
| 1.1 | 2024-01-31 | 357.89M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.1--pyhdfd78af_0 | |
| 1.1.2 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.1.2--pyhdfd78af_0 | ||
| 1.1.2 | 2024-04-02 | 386.88M | docker pull quay.io/biocontainers/varvamp:1.1.2--pyhdfd78af_0 | |
| 1.1.2 | 2024-04-03 | 364.86M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.1.2--pyhdfd78af_0 | |
| 1.2.0 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.2.0--pyhdfd78af_0 | ||
| 1.2.0 | 2024-05-07 | 367.07M | docker pull quay.io/biocontainers/varvamp:1.2.0--pyhdfd78af_0 | |
| 1.2.0 | 2024-05-07 | 346.28M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.2.0--pyhdfd78af_0 | |
| 1.1.3 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.1.3--pyhdfd78af_0 | ||
| 1.1.3 | 2024-04-26 | 367.17M | docker pull quay.io/biocontainers/varvamp:1.1.3--pyhdfd78af_0 | |
| 1.1.3 | 2024-04-26 | 346.24M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.1.3--pyhdfd78af_0 | |
| 1.2.1 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.2.1--pyhdfd78af_0 | ||
| 1.2.1 | 2024-09-06 | 378.77M | docker pull quay.io/biocontainers/varvamp:1.2.1--pyhdfd78af_0 | |
| 1.2.1 | 2024-09-06 | 358.64M | singularity run https://depot.galaxyproject.org/singularity/varvamp:1.2.1--pyhdfd78af_0 | |
| 1.2.2 | 0.00M | conda install -c conda-forge -c bioconda varvamp==1.2.2--pyhdfd78af_0 | ||
| 1.2.2 | 2025-02-07 | 354.28M | docker pull quay.io/biocontainers/varvamp:1.2.2--pyhdfd78af_0 |